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Background
Background
Bioperl toolkit
Object oriented (OO) programing
Terminology
Object
Method
Class
analogy
Accessing documents
Quick Tour of Bioperl
Sequence Input/output
Bio::SeqIO
and
Bio::Seq
Exercises:
Accessing remote databases
Bio::Seq objects
Exercises
Accessing Sequence Features
Restriction enzyme sites
Exercises:
Bio::AlignIO
Exercises:
Running external multiple sequence alignment program
Exercises:
Other IO objects
Interacting with BLAST
About this document ...
Naoki Takebayashi 2011-11-17